Gene

Gmax Glyma.01G003100

From GreeNC


Gene information
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This table contains information about coordinates, assembly and annotation regarding the lncRNA-transcribing gene. In details, it shows whether this this gene transcribes any protein-coding transcript.

Gene alias / name Chrom. Start End Source Assembly Species Details

Gmax_Glyma.01G003100
Glyma.01G003100
Chr01 369871 372222 Phytozome Wm82.a2.v1 Glycine_max
Coding?
No


Transcript features
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This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.

Transcript alias / name Confidence Pre-miRNA Length Sequence Details

Gmax_Glyma.01G003100.1
Glyma.01G003100.1
PAC:30545236
High No 636
Coding potential...
Type: noncoding Potential: -1.074
Folding energies...
MFEI: -26.604 AMFE: -0.682
GC content
%: 38.994
Gmax_Glyma.01G003100.2
Glyma.01G003100.2
PAC:30545237
High No 1066
Coding potential...
Type: noncoding Potential: -1.029
Folding energies...
MFEI: -24.747 AMFE: -0.656
GC content
%: 37.711


Gene models
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Transcripts can be colored as magenta (coding transcripts), green (high confidence lncRNAs), cyan (low confidence lncRNAs), or salmon (other ncRNAs).

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