Gene

Bdistachyon Bradi1g00291

From GreeNC


Gene information
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This table contains information about coordinates, assembly and annotation regarding the lncRNA-transcribing gene. In details, it shows whether this this gene transcribes any protein-coding transcript.

Gene alias / name Chrom. Start End Source Assembly Species Details

Bdistachyon_Bradi1g00291
Bradi1g00291
Bd1 167458 168254 Phytozome v3.1 Brachypodium_distachyon
Coding?
No


Transcript features
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This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.

Transcript alias / name Confidence Pre-miRNA Length Sequence Details

Bdistachyon_Bradi1g00291.1
Bradi1g00291.1
PAC:32793208
High No 797
Coding potential...
Type: noncoding Potential: -1.049
Folding energies...
MFEI: -31.807 AMFE: -0.609
GC content
%: 52.196


Gene models
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Transcripts can be colored as magenta (coding transcripts), green (high confidence lncRNAs), cyan (low confidence lncRNAs), or salmon (other ncRNAs).

Bradi1g00291.png