Gene

Acomosus Aco000043

From GreeNC


Gene information
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This table contains information about coordinates, assembly and annotation regarding the lncRNA-transcribing gene. In details, it shows whether this this gene transcribes any protein-coding transcript.

Gene alias / name Chrom. Start End Source Assembly Species Details

Acomosus_Aco000043
Aco000043
LG12 5287795 5288149 Phytozome v3 Ananas_comosus
Coding?
No


Transcript features
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This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.

Transcript alias / name Confidence Pre-miRNA Length Sequence Details

Acomosus_Aco000043.1
Aco000043.1
PAC:33043144
High No 204
Coding potential...
Type: noncoding Potential: -1.591
Folding energies...
MFEI: -17.353 AMFE: -0.365
GC content
%: 47.549


Gene models
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Transcripts can be colored as magenta (coding transcripts), green (high confidence lncRNAs), cyan (low confidence lncRNAs), or salmon (other ncRNAs).

Aco000043.png